Table 3 The validated target genes of some Zn-responsive miRNAs
From: Integrated analyses of miRNAome and transcriptome reveal zinc deficiency responses in rice seedlings
miRNA | Target gene | Target gene annotation | Potential function |
|---|---|---|---|
osa-miR398a | Os07g0665200 | Cu/Zn-superoxidase dismutase2/CSD2 | Stress tolerance, antioxidant defense, copper homeostasis |
Os03g0351500 | Cu/Zn-superoxidase dismutase1/CSD1 | ||
Os11g0203300 | Superoxide dismutaseX/SODX | ||
Os04g0573200 | Copper chaperone for superoxide dismutase/CCSD | ||
osa-miR408-3p | Os08g0482700 | Uclacyanin-like protein UCL30 | Stress tolerance, photosynthesis, copper homeostasis, |
Os03g0709100 | Uclacyanin-like protein UCL8 | ||
Os04g0545600 | Uclacyanin-like protein UCL15 | ||
Os06g0218600 | Uclacyanin-like protein UCL16 | ||
Os02g0653200 | Plantacyanin like 2/Uclacyanin-like protein UCL4 | ||
Os02g0731400 | Plantacyanin-like 3/Uclacyanin-like protein UCL5 | ||
Os02g0758800 | Plantacyanin-like 4/Uclacyanin-like protein UCL6 | ||
Os01g0827300 | Laccase 3/LAC3 | ||
Os03g0297900 | Laccase 12/LAC12 | ||
osa-miR528-5p | Os06g0567900 | Ascorbate oxidase 2 | Reactive oxygen species homeostasis, stress tolerance, copper homeostasis, strigolactone signal perception |
Os08g0137400 | Uclacyanin-like protein UCL23 | ||
Os07g0570550 | Cupredoxin domain containing protein | ||
Os06g0154200 | F-box/LRR-repeat MAX2 homolog/DWARF3 | ||
Os08g0561700 | Superoxide dismutase 4/CSD4 | ||
osa-miR397b-5p | Os05g0458600 | Laccase 15/LAC15 | Copper homeostasis, lignin biosynthesis, brassinosteroid response |