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Table 3 Some target genes of alkaline-responsive lncRNAs related to photosynthetic carbon assimilation

From: Long non-coding RNAs in the alkaline stress response in sugar beet (Beta vulgaris L.)

Comparison group

lncRNA ID

P-value

Target gene id

Target gene description

ST_vs_C

LNC_004949

−1.396038917

LOC104907718

photosystem I subunit O

LNC_004949

−1.396038917

LOC104897526

glucose-6-phosphate 1-dehydrogenase

LNC_007731

−1.126389158

LOC104897387

carbonic anhydrase 2

LNC_007731

−1.126389158

LOC104893033

glycerol-3-phosphate acyltransferase

LNC_007731

−1.126389158

LOC104902037

carbonic anhydrase

LNC_007731

−1.126389158

LOC104900039

photosystem II repair protein PSB27-H1

LNC_007731

−1.126389158

LOC104897526

glucose-6-phosphate 1-dehydrogenase

LT_vs_C

LNC_000365

−1.291328691

LOC104902037

carbonic anhydrase

LNC_000365

−1.291328691

LOC104908971

magnesium protoporphyrin IX methyltransferase

LNC_000365

−1.291328691

LOC104890676

chloroplast stem-loop binding protein of 41 kDa b

LNC_000365

−1.291328691

LOC104889354

magnesium-chelatase subunit ChlH

LNC_000365

−1.291328691

LOC104900584

magnesium-chelatase subunit ChlI

LNC_000365

−1.291328691

LOC104889639

magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase

LNC_007731

−1.261549284

LOC104902037

carbonic anhydrase

LNC_007731

−1.261549284

LOC104889639

magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase

LNC_007731

−1.261549284

LOC104897526

glucose-6-phosphate 1-dehydrogenase