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Table 3 The DEGs involved in flavonoid pathway in alfalfa cultivars upon inoculation of two rhizobial strains

From: Plant transcriptome analysis reveals specific molecular interactions between alfalfa and its rhizobial symbionts below the species level

Alfalfa cultivar

G9 a

G3

Q

L

Gene

Gene product

Comparison

LL2 vs. WLP2

LL2 vs. QL2

WLP2 vs. LL1

G3L3 vs. LP3

Medsa009599

−3.7 b

   

CHS

Chalcone and stilbene synthase family protein

Medsa059715

   

−3.7

CHS

naringenin-chalcone synthase, partial

Medsa044389

   

−2.8

CHS

chalcone synthase 3, partial

Medsa086087

   

−2.5

CHS

naregenin-chalcone synthase, partial

Medsa009493

   

−2.1

CHS

Chain A, Chalcone Synthase--F215s Mutant

Medsa030411

   

−2

CHS

Chalcone synthase 2

Medsa026473

   

−1.9

CHS

chalcone and stilbene synthase family protein

Medsa044387

   

−1.7

CHS

chalcone synthase

Medsa026474

   

−1.6

CHS

chalcone synthase 4, partial

Medsa072385

   

− 1.4

CHS

chalcone synthase 3, partial

Medsa028257

  

4.4

 

F3H

naringenin 3-dioxygenase (flavanone-3-hydroxylase)

Medsa086086

   

−1.3

CHS

chalcone synthase

Medsa055925

   

−1.2

CHS

Chain A, Chalcone Synthase

Medsa055923

   

−2.2

CHS

chalcone synthase, partial

Medsa077779

   

−6.5

CHS

Chalcone synthase

Medsa063968

   

−1.5

CHS

chalcone-flavanone isomerase family protein

Medsa014983

 

−1.5

  

HCT

HXXXD-type acyl-transferase family protein

Medsa030991

   

1.7

HCT

hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyl transferase

Medsa005120

   

1.4

HCT

hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyl transferase

Medsa031435

   

−8.3

HCT

spermidine hydroxycinnamoyl transferase

Medsa024093

   

−2.8

DFR

dihydroflavonol 4-reductase

Medsa031435

  

−7.7

 

HCT

spermidine hydroxycinnamoyl transferase

Medsa016755

   

−6.3

HCT

HXXXD-type acyl-transferase family protein

Medsa018594

 

−1.9

  

DFR

dihydroflavonol 4-reductase-like protein

Medsa017082

   

−5.7

HCT

HXXXD-type acyl-transferase family protein

Medsa017084

   

−5.6

HCT

HXXXD-type acyl-transferase family protein

Medsa016758

   

− 5.4

HCT

HXXXD-type acyl-transferase family protein

Medsa032425

   

−5.1

HCT

anthranilate N-benzoyltransferase

Medsa017083

   

−5

HCT

HXXXD-type acyl-transferase family protein

Medsa084572

   

−4.3

HCT

anthranilate N-benzoyltransferase

Medsa016757

   

−4

HCT

anthranilate N-benzoyltransferase

Medsa084570

   

−2.9

HCT

anthranilate N-benzoyltransferase

Medsa046285

   

−1.9

HCT

HXXXD-type acyl-transferase family protein

Medsa076343

   

−3.4

HCT

HXXXD-type acyl-transferase family protein

Medsa020332

  

2.7

 

HCT

HXXXD-type acyl-transferase family protein

Medsa075370

   

−2.4

HCT

HXXXD-type acyl-transferase family protein

Medsa032175

   

−2

HCT

HXXXD-type acyl-transferase family protein

Medsa064961

   

−2.1

HCT

anthranilate N-benzoyltransferase

Medsa075250

   

−2.3

HCT

anthranilate N-benzoyltransferase

Medsa010989

   

1.6

HCT

anthranilate N-benzoyltransferase

Medsa019200

   

−6.6

E5.5.1.6

chalcone-flavanone isomerase family protein

  1. aM. sativa cultivars, G9 for Gannong No. 9; G3 for Gannong No. 3; Q for Qingshui; L for Longzhong
  2. bData are Log2 (fold change) values for each differentially expressed gene (DEG)