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Table 1 Overview of the RNA sequencing results

From: Identification of drought tolerant mechanisms in a drought-tolerant maize mutant based on physiological, biochemical and transcriptomic analyses

Sample

CC 1

CC 2

CC 3

CD 1

CD 2

CD 3

TC 1

TC 2

TC 3

TD 1

TD 2

TD 3

Raw Reads Number

49,088,148

47,002,534

45,969,322

46,547,122

47,791,948

45,774,724

47,070,676

45,172,694

42,684,122

47,715,762

46,324,412

47,903,578

Clean Reads Number

47,579,140

45,624,176

44,936,056

45,324,662

46,358,612

44,239,972

45,444,044

44,010,808

41,640,528

46,491,316

45,179,856

46,694,940

Clean Reads Rate (%)

96.93

97.07

97.75

97.37

97

96.65

96.54

97.43

97.56

97.43

97.53

97.48

Raw Bases Number

7,363,222,200

7,050,380,100

6,895,398,300

6,982,068,300

7,168,792,200

6,866,208,600

7,060,601,400

6,775,904,100

6,402,618,300

7,157,364,300

6,948,661,800

7,185,536,700

Clean Bases Number

7,136,871,000

6,843,626,400

6,740,408,400

6,798,699,300

6,953,791,800

6,635,995,800

6,816,606,600

6,601,621,200

6,246,079,200

6,973,697,400

6,776,978,400

7,004,241,000

Mapped Reads

40,747,260

41,595,903

39,823,188

43,134,590

41,366,533

40,666,278

42,238,391

40,830,809

42,451,246

41,556,156

40,124,518

37,767,450

Mapping Rate

0.899

0.8973

0.9002

0.9066

0.9067

0.905

0.9085

0.9037

0.9091

0.9144

0.9117

0.907

  1. Note: CC: Chang7–2 under control; CD: Chang7–2 under drought stress; TC: Chang7–2 t under control; TD: Chang7–2 t under drought stress. Raw reads number: the total number of original sequences; clean reads number: the total number of high-quality filtered sequences; clean reads rate (%): the percentage of the number of high quality sequences after filtering to the number of original sequences; raw bases number: the total number of bases in the original off-line sequence; clean bases number: the total number of bases of the filtered high quality sequence; mapped reads: the number of sequences match to the genome; mapping rate: the percentage of sequences match to the genome