Table 1 Summary of new chloroplast genome sequences reported in this paper
Species | Field collecting location | Sequencing technology | Collection data (Herbarium) | Genbank accession | Total sequencing effort (millions of reads) | Plastid genome mean coverage (reduced data) | Plastid assembly length | Inverted repeat length |
|---|---|---|---|---|---|---|---|---|
Boykinia aconitifolia | Alleghany County, North Carolina, U.S.A. | BGI-SEQ | Folk 249 (FLAS) | MN496058 | 734.3 | 374.8× | 154,368 bp | 25,769 bp |
Cercidiphyllum japonicum | Cultivation | BGI-SEQ | Whitten 5886 (FLAS) | MN496059 | 799.1 | 394.8× | 159,897 bp | 26,434 bp |
Daphniphyllum macropodum | Cultivation | BGI-SEQ | Whitten 5884 (FLAS) | MN496060 | 684.5 | 66.0× | 160,408 bp | 26,605 bp |
Fortunearia sinensis | Cultivation | BGI-SEQ | Folk 253 (FLAS) | MN496061 | 727.7 | 90.2× | 159,413 bp | 26,274 bp |
Heuchera abramsii | Los Angeles County, California, U.S.A. | Illumina HiSeq | Folk I-40 (OS) | MN496062 | 211.8 | 710.3× | 155,527 bp | 25,838 bp |
Heuchera alba | Pendleton County, West Virginia, U.S.A. | Illumina HiSeq | Folk 63 (OS) | MN496063 | 160.8 | 252.4× | 155,360 bp | 25,632 bp |
Heuchera caespitosa | Ventura County, California, U.S.A. | Illumina HiSeq | Folk 48 (OS) | MN496064 | 171.7 | 490.5× | 155,520 bp | 25,834 bp |
Heuchera eastwoodiae | Yavapai County, Arizona, U.S.A. | Illumina HiSeq | Folk 35 (OS) | MN496065 | 82.3 | 336.0× | 155,174 bp | 25,605 bp |
Heuchera grossulariifolia var. grossulariifolia | Idaho County, Idaho, U.S.A. | Illumina HiSeq | Folk 160 (OS) | MN496066 | 226.6 | 742.7× | 155,493 bp | 25,645 bp |
Heuchera longipetala var. longipetala | Cultivation | Illumina HiSeq | Folk I-21 (OS) | MN496067 | 223.6 | 768.3× | 155,418 bp | 25,638 bp |
Heuchera mexicana var. mexicana | Cultivation | BGI-SEQ | Folk I-51 (OS) | MN496068 | 710.8 | 150.3× | 155,451 bp | 25,638 bp |
Heuchera parvifolia var. utahensis | Cultivation | Illumina HiSeq | Folk I-56 (OS) | MN496069 | 273.3 | 738.5× | 155,350 bp | 25,633 bp |
Leptarrhena pyrolifolia | Skagit County, Washington, U.S.A. | BGI-SEQ | J.V. Freudenstein 3069 (FLAS) | MN496070 | 752.2 | 253.8× | 155,055 bp | 25,781 bp |
Mitella diphylla | Monroe County, Ohio, U.S.A. | Illumina HiSeq | Folk 88 (OS) | MN496071 | 230.8 | 357.0× | 155,646 bp | 25,753 bp |
Mitella pentandra | King County, Washington, U.S.A. | Illumina HiSeq | Folk 128 (OS) | MN496072 | 264.4 | 341.2× | 155,470 bp | 25,620 bp |
Mukdenia rossii | Cultivation | BGI-SEQ | Folk 259 (FLAS) | MN496073 | 799.0 | 330.9× | 156,927 bp | 25,585 bp |
Oresitrophe rupifraga | Cultivation | BGI-SEQ | Folk 257 (FLAS) | MN496074 | 678.1 | 261.3× | 156,787 bp | 25,586 bp |
Ribes nevadense | Shasta County, California, U.S.A. | BGI-SEQ | Nelson 2018–028 (FLAS) | MN496075 | 782.7 | 234.3× | 157,715 bp | 25,887 bp |
Ribes roezlii | Shasta County, California, U.S.A. | BGI-SEQ | Nelson 2018–027 (FLAS) | MN496076 | 723.6 | 262.7× | 157,781 bp | 25,967 bp |
Rodgersia sambucifolia | Cultivation | BGI-SEQ | R.A. Folk 266 (FLAS) | MN496077 | 637.3 | 193.2× | 157,289 bp | 25,556 bp |
Saniculiphyllum guangxiense | Funing County, Yunnan, China | Illumina HiSeq | Xiang 1271 (KUN) | MN496078 | 180.9 | 179.6× | 151,704 bp | 26,109 bp |
Saxifraga stolonifera | Cultivation | BGI-SEQ | Folk 258 (FLAS) | MN496079 | 623.5 | 238.2× | 151,060 bp | 25,412 bp |
Sycopsis sinensis | Cultivation | BGI-SEQ | Folk 256 (FLAS) | MN496080 | 746.2 | 117.7× | 159,043 bp | 26,230 bp |