De novo assembly and Transcriptome characterization of an endemic species of Vietnam, Panax vietnamensis Ha et Grushv., including the development of EST-SSR markers for population genetics

Table 5 Genetic diversity within P. vietnamensis populations at nine loci

Populations	N	A	A_E	P%	H_O	H_E	F	P value of bottleneck
Populations	N	A	A_E	P%	H_O	H_E	F	TPM	SMM
DT	32	2.6	2.1	88.89	0.412	0.454	0.114*	0.002	0.004
TN	18	2.6	2.1	88.89	0.444	0.473	0.092	0.002	0.002
KT	48	2.8	2.2	100.0	0.410	0.510	0.185*	0.001	0.001
Mean		2.6	2.2	92.59	0.422	0.479	0.130*

Note: N = population size; A = mean number of alleles per locus; A_E = mean number of effective alleles; P% = percentage of polymorphic loci; H_Oand H_E = mean observed and expected heterozygosities, respectively; F = fixation index with *p < 0.05

ISSN: 1471-2229