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Table 3 Number of proteins annotated via differential protein database

From: Full-length transcriptome analysis of Phytolacca americana and its congener P. icosandra and gene expression normalization in three Phytolaccaceae species

Databases

P. americana

P. icosandra

Annotated Number

300 ≤ length < 1000

Length ≥ 1000

Annotated Number

300 ≤ length < 1000

Length ≥ 1000

COG

16,701

1494

15,197

17,249

1496

15,742

GO

31,055

4171

26,838

32,733

4157

28,535

KEGG

17,017

2191

14,798

18,130

2211

15,893

KOG

26,396

2853

23,508

28,948

2933

25,979

Pfam

32,822

3571

29,239

34,684

3708

30,963

Swiss-Prot

29,608

3503

26,055

31,485

3524

27,920

eggNOG

40,363

5251

35,043

43,423

5262

38,109

Nr

41,485

5612

35,784

44,692

5590

39,026

All

41,676

5699

35,884

45,050

5705

39,267

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BMC Plant Biology

ISSN: 1471-2229

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