Sample | Total raw reads (M) | Total clean reads (M) | Clean reads number | Clean reads ratio(%) | Q20(%) | Q30(%) | Total mapping(%) |
---|---|---|---|---|---|---|---|
BC 1 | 64.44 | 61.88 | 61,877,098 | 96.03 | 97.71 | 90.11 | 89.39 |
BC 2 | 64.44 | 61.94 | 61,944,568 | 96.13 | 97.73 | 90.28 | 89.36 |
BC 3 | 64.4 | 61.84 | 61,843,080 | 96.03 | 97.83 | 90.53 | 84.9 |
BZ 1 | 64.44 | 61.73 | 61,727,048 | 95.79 | 97.71 | 90.17 | 89.88 |
BZ 2 | 64.44 | 61.93 | 61,932,718 | 96.11 | 97.81 | 90.51 | 89.7 |
BZ 3 | 64.43 | 62.01 | 62,009,278 | 96.24 | 97.83 | 90.54 | 87.89 |
AC 1 | 64.4 | 62.03 | 62,029,070 | 96.31 | 97.83 | 90.47 | 89.16 |
AC 2 | 64.44 | 61.94 | 61,937,642 | 96.12 | 97.78 | 90.31 | 88.4 |
AC 3 | 64.41 | 61.74 | 61,742,462 | 95.85 | 97.62 | 89.72 | 90.01 |
AZ 1 | 64.44 | 61.79 | 61,785,376 | 95.88 | 97.63 | 89.85 | 89.67 |
AZ 2 | 64.4 | 61.86 | 61,859,516 | 96.06 | 97.78 | 90.34 | 90.7 |
AZ 3 | 64.46 | 62.16 | 62,155,874 | 96.43 | 97.88 | 90.7 | 87.79 |