Variant type | Variant position | Gene ID | Functional annotation | Genotype | Variant allele effect on protein sequence | Variant amino acid effect on protein function | PROVEAN scorea | ||
---|---|---|---|---|---|---|---|---|---|
PN | SG | CN | |||||||
SG specific | Chr2:2,837,618 | VIT_02s0025g03330 | H(+)-ATPase 4 AHA4 | A:A | A:G | A:A | Y274C | Deleterious | -7.74 |
CN specific | Chr6:4,776,574 | VIT_06s0004g03800 | DNA-binding protein | C:C | C:C | C:T | T1383M | Neutral | -1.06 |
CN specific | Chr11:2,940,013 | VIT_11s0016g03590 | Transducing protein | A:A | A:A | A:G | I1114V | Neutral | 0.48 |
CN specific | Chr11:5,363,589 | VIT_11s0016g05820 | CCR4-NOT transcription complex subunit 10 | G:G | G:G | A:G | V317M | Neutral | -0.76 |
SG specific | Chr14: 23,114,120 | VIT_14s0083g00910 | Auxin-independent growth promoter | C:C | C:T | C:C | R536C | Deleterious | -2.71 |