Table 3 Differentially expressed transcription factors (TFs) between CK and BS
From: Transcriptome and metabolomic analysis to reveal the browning spot formation of ‘Huangguan’ pear
TF family | Number | Up | Down | Description |
|---|---|---|---|---|
AP2-EREBP | 53 | 40 | 13 | Ethylene-responsive transcription factor |
MYB | 49 | 43 | 6 | MYB-related protein |
WRKY | 46 | 44 | 2 | WRKY DNA -binding domain |
bHLH | 35 | 21 | 14 | Helix-loop-helix DNA-binding domain |
NAC | 26 | 24 | 2 | NAC domain-containing protein |
C2H2 | 17 | 16 | 1 | Zinc finger protein |
HSF | 16 | 16 | 0 | Heat stress transcription factor |
GRAS | 15 | 15 | 0 | scarecrow-like protein |
LOB | 13 | 10 | 3 | LOB domain-containing protein |
MADS | 10 | 8 | 2 | SRF-type transcription factor |
G2-like | 10 | 9 | 1 | myb-related protein |
C3H | 9 | 8 | 1 | Zinc finger CCCH domain-containing protein |
mTERF | 9 | 8 | 1 | mTERF domain-containing protein |
C2C2-Dof | 9 | 6 | 3 | dof zinc finger protein |
TCP | 7 | 5 | 2 | Circadian rhythm - plant |
FHA | 7 | 5 | 2 | FHA domain-containing protein |
C2C2-GATA | 7 | 4 | 3 | GATA-binding protein |
Tify | 7 | 5 | 2 | jasmonate ZIM domain-containing protein |
C2C2-CO-like | 7 | 6 | 1 | zinc finger protein CONSTANS |
ABI3VP1 | 6 | 3 | 3 | B3 domain-containing protein |
Trihelix | 6 | 5 | 1 | trihelix transcription factor |
OFP | 6 | 3 | 3 | isoleucyl-tRNA synthetase |
FAR1 | 5 | 5 | 0 | zinc finger SWIM domain-containing protein |
ARF | 5 | 3 | 2 | auxin response factor |
other TFs | 43 | 29 | 14 | |
total | 423 | 341 | 82 |