Table 5 Stable marker loci at Taian location of different years (P < 10–4)
Trait | SNP marker | Chr. | Position | P | R2 (%) |
|---|---|---|---|---|---|
Ca | Excalibur_c15014_1170 | 5A | 50 | 3.71E-04 | 6.76 |
GENE-3167_70 | 5A | 50 | 3.71E-04 | 6.76 | |
Kukri_c2781_719 | 5A | 50 | 3.71E-04 | 6.76 | |
Kukri_c41797_393 | 5A | 53 | 7.13E-06 | 10.97 | |
RFL_Contig2187_1025 | 5A | 53 | 7.13E-06 | 10.97 | |
Mn | BobWhite_rep_c66032_270 | 1B | 71 | 2.38E-04 | 6.99 |
wsnp_BE443332B_Ta_2_2 | 1B | 71 | 2.21E-04 | 7.05 | |
wsnp_BE443930B_Ta_2_2 | 1B | 71 | 2.82E-04 | 6.81 | |
BS00022619_51 | 1B | 75 | 7.72E-05 | 8.14 | |
BS00022920_51 | 1B | 75 | 6.72E-05 | 8.28 | |
Excalibur_c5218_75 | 1B | 75 | 7.28E-05 | 8.20 | |
IAAV2125 | 1B | 75 | 6.72E-05 | 8.28 | |
IAAV6731 | 1B | 75 | 6.72E-05 | 8.28 | |
IAAV9005 | 1B | 75 | 1.12E-04 | 7.74 | |
JD_c3116_778 | 1B | 75 | 6.26E-05 | 8.33 | |
Ra_c37969_549 | 1B | 75 | 8.25E-05 | 8.05 | |
RAC875_c19014_725 | 1B | 75 | 6.26E-05 | 8.33 | |
RAC875_rep_c112555_200 | 1B | 75 | 6.72E-05 | 8.28 | |
RAC875_rep_c119728_146 | 1B | 75 | 8.92E-05 | 7.97 | |
TA003725-0553 | 1B | 75 | 8.92E-05 | 7.97 | |
Tdurum_contig81102_102 | 1B | 75 | 8.92E-05 | 7.97 | |
wsnp_BF478690B_Ta_2_1 | 1B | 75 | 6.72E-05 | 8.28 | |
wsnp_Ex_c4561_8184576 | 1B | 75 | 6.26E-05 | 8.33 | |
Cu | RAC875_c23158_301 | 1A | 77 | 6.31E-04 | 6.28 |
Zn | BS00057451_51 | 3B | 67 | 7.87E-07 | 13.25 |
Se | Tdurum_contig4974_355 | 4B | 61 | 8.65E-05 | 8.70 |
wsnp_Ex_c14654_22713386 | 7A | 42 | 2.66E-05 | 9.68 | |
Cd | Kukri_c105601_74 | 1B | 51 | 2.15E-04 | 7.29 |
RAC875_c25101_644 | 1B | 51 | 2.15E-04 | 7.29 | |
BS00022255_51 | 1B | 57 | 1.50E-04 | 7.67 | |
Kukri_c18006_1568 | 1B | 57 | 2.15E-04 | 7.29 | |
RAC875_c8271_1352 | 1B | 57 | 2.15E-04 | 7.29 | |
RAC875_c8271_1469 | 1B | 57 | 2.15E-04 | 7.29 | |
RAC875_c8271_887 | 1B | 57 | 2.15E-04 | 7.29 | |
RAC875_rep_c96733_369 | 1B | 57 | 2.15E-04 | 7.29 | |
wsnp_Ku_c11987_19472688 | 1B | 57 | 2.15E-04 | 7.29 | |
wsnp_Ku_c11987_19473636 | 1B | 58 | 2.06E-04 | 7.35 | |
D_contig25392_201 | 1B | 61 | 1.50E-04 | 7.67 | |
Kukri_c23300_267 | 1B | 61 | 2.15E-04 | 7.29 | |
RAC875_c64253_435 | 5A | 83 | 8.35E-04 | 5.92 | |
Pb | BS00022255_51 | 1B | 57 | 1.28E-04 | 7.90 |
D_contig25392_201 | 1B | 61 | 1.28E-04 | 7.90 | |
RAC875_c9594_1289 | 1D | 65 | 5.83E-04 | 6.37 | |
BS00091763_51 | 2A | 167 | 5.30E-04 | 6.41 | |
GENE-0762_808 | 2A | 168 | 1.51E-04 | 7.72 | |
wsnp_Ex_rep_c108004_91402649 | 2A | 168 | 2.24E-04 | 7.31 | |
wsnp_Ex_c14162_22093694 | 2B | 85 | 3.44E-04 | 7.49 | |
BS00022424_51 | 3A | 141 | 5.65E-05 | 8.76 | |
RAC875_c17479_359 | 3A | 93 | 8.02E-04 | 5.99 | |
Tdurum_contig61465_781 | 4B | 61 | 2.53E-04 | 7.18 | |
wsnp_Ex_c28908_37989067 | 5A | 27 | 1.10E-05 | 10.53 | |
wsnp_Ku_c1254_2498515 | 5A | 27 | 3.89E-05 | 9.16 | |
BobWhite_c46416_247 | 5B | 183 | 3.24E-04 | 6.92 | |
BS00067074_51 | 5B | 183 | 1.29E-04 | 7.88 | |
CAP7_c8713_356 | 5B | 183 | 1.29E-04 | 7.88 | |
Kukri_c4594_825 | 5B | 183 | 3.24E-04 | 6.92 | |
RAC875_c1035_65 | 5B | 183 | 1.29E-04 | 7.88 | |
Tdurum_contig60189_310 | 5B | 183 | 1.30E-04 | 7.89 | |
BS00068775_51 | 5B | 184 | 1.65E-04 | 7.72 | |
CAP7_c3697_87 | 6B | 86 | 1.31E-04 | 7.87 | |
Tdurum_contig68217_361 | 6B | 86 | 1.31E-04 | 7.87 | |
BobWhite_c17095_237 | 7A | 136 | 3.65E-04 | 6.80 | |
Excalibur_c19455_3496 | 7B | 163 | 9.11E-06 | 10.81 | |
Excalibur_c11062_582 | 7B | 171 | 1.90E-06 | 12.47 | |
Excalibur_c25090_830 | 7B | 171 | 8.11E-07 | 13.43 | |
RAC875_rep_c110526_229 | 7B | 171 | 1.90E-06 | 12.47 |