Skip to main content

Table 4 Differential expressed defense related miRTGs in response to Ralstonia solanacearum

From: Transcriptomic analysis to reveal the differentially expressed miRNA targets and their miRNAs in response to Ralstonia solanacearum in ginger species

Gene annotation

No. of genes

Ginger upregulated

Mango ginger upregulated

Target genes

Abscisic acid signalling

7

2

2

FERON_ARATH, UBA2A_ARATH, EDR1_ARATH, CDPKS_ARAT

Activation of protein kinase

4

2

4

M3K3A_ARATH

Autophagosome assembly

1

0

0

ATG7_ARATH

Brassinosteroid mediated signaling pathway

1

1

1

GLO1_ARATH

Defense response to bacterium

13

12

13

Y2766_ARATH, WRK53_ARATH, POP3_ARATH, NPR2_ORYSJ, SIR4_ARATH, P2C59_ARATH, RENT3_ARATH, BAHL2_ORYSI, CRK25_ARATH

Cellular response to jasmonic acid

7

3

7

HNRPQ_ARATH

Cellular response to osmotic stress

1

1

1

NTL9_ARATH

Cellular response to water deprivation

2

2

2

CP41B_ARATH

Ceramide biosynthetic process

2

2

2

IPCS_ORYSJ

Defense response

24

14

24

LRR2_ARATH, PBL17_ARATH, ERG1_ORYSJ, DRL17_ARATH, WRK19_ARATH, PBL19_ARATH, PBL3_ARATH, PBL16_ARATH, EDR2L_ARATH, LRKS5_ARATH, RPS2_ARATH, DGK5_ARATH, ERF82_ARATH, MKP1_ARATH, LRR1_ARATH

Defense response to fungus

7

4

7

CML36_ARATH, BBD1_ARATH, PRT6_ARATH, C3H47_ARATH

Carbohydrate metabolism process

2

2

2

E1314_ARATH

Ethylene signaling pathway

4

3

4

EDR2_ARATH