From: Identification of Brassica napus small RNAs responsive to infection by a necrotrophic pathogen
Sample | Raw reads | Clean filtered reads* | Unique B. napus reads†| Structural RNA‡ | Clean mappable reads††| Uniquely mapped reads | Reads mapping to multiple locations | Total mapped to B. napus | Total mapped to B. napus (%) |
---|---|---|---|---|---|---|---|---|---|
Mock | 23,754,736 | 20,144,362 | 8,944,885 | 318,393 | 8,626,492 | 1,047,207 | 7,416,613 | 8,463,820 | 98.1 |
Mock | 22,377,118 | 18,983,632 | 7,767,860 | 311,538 | 7,456,322 | 1,103,293 | 6,242,937 | 7,346,230 | 98.5 |
Mock | 31,509,749 | 26,430,696 | 11,421,524 | 450,137 | 10,971,387 | 1,535,228 | 9,301,292 | 10,836,520 | 98.8 |
Infected | 26,483,807 | 20,626,924 | 3,779,014 | 202,125 | 3,576,889 | 445,577 | 2,310,074 | 2,755,651 | 77 |
Infected | 23,182,766 | 18,818,235 | 3,866,998 | 223,567 | 3,643,431 | 462,630 | 2,214,409 | 2,677,039 | 73.5 |
Infected | 24,782,597 | 21,884,135 | 6,016,997 | 508,508 | 5,508,489 | 570,565 | 4,180,632 | 4,751,197 | 86.3 |
Total | 152,090,773 | 126,887,984 | 41,797,278 | 2,014,268 | 39,783,010 | 5,164,500 | 31,665,957 | 36,830,457 | 87.3 |