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Table 4 List of 15 salt responsive candidate genes highly expressed in leaf tissue of salt tolerant alfalfa cultivar ‘Halo’

From: Transcriptomic analysis of differentially expressed genes in leaves and roots of two alfalfa (Medicago sativa L.) cultivars with different salt tolerance

Gene ID

Nr IDa

log2FCb (Leaf)

Putative function

0h

3h

27h

 

MS.gene024018

KHN29288.1

NA

8.9

4.9

Monothiol glutaredoxin-S14, chloroplastic [Glycine soja]

MS.gene029055

AFK45194.1

5.2

7.3

5.8

CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 [Medicago truncatula (barrel medic)]

MS.gene029201

AET03044.2

NA

7.5

9.0

replication protein A 70 kDa DNA-binding subunit C [Medicago truncatula (barrel medic)]

MS.gene029206

XP_024628388.1

NA

4.7

5.0

FAD synthetase 1, chloroplastic [Medicago truncatula (barrel medic)]

MS.gene037960

XP_003589866.2

NA

2.7

2.7

nuclear pore complex protein NUP1 [Medicago truncatula (barrel medic)]

MS.gene038586

RHN67456.1

NA

6.5

6.2

putative minus-end-directed kinesin ATPase [Medicago truncatula]

MS.gene065734

XP_013467963.1

6.4

9.8

6.9

uncharacterized LOC25483798 [Medicago truncatula (barrel medic)]

MS.gene07287

XP_003591401.1

8.8

11.2

10.5

calvin cycle protein CP12-2, chloroplastic [Medicago truncatula (barrel medic)]

MS.gene24098

PNY14915.1

5.1

5.7

6.2

thioredoxin-like protein CDSP32 chloroplastic-like [Trifolium pratense]

MS.gene24746

RHN68722.1

6.5

4.9

5.3

hypothetical protein MtrunA17_Chr3g0116951[Medicago truncatula]

MS.gene36621

XP_003627058.1

NA

4.7

4.5

stem 28 kDa glycoprotein [Medicago truncatula (barrel medic)]

MS.gene39381

RHN38725.1

NA

6.6

6.5

putative nucleoporin protein Ndc1-Nup [Medicago truncatula]

MS.gene63155

RHN41150.1

NA

7.3

4.2

putative protein kinase RLK-Pelle-LRR-XII-1 family [Medicago truncatula]

MS.gene81767

XP_013467963.1

NA

4.8

3.6

uncharacterized LOC25483798 [Medicago truncatula (barrel medic)]

MS.gene99197

AIP98334.1

4.6

4.8

4.7

ZEP [Medicago sativa]

  1. aNr ID is the protein accession number in NCBI non redundant protein database
  2. blog2FC stands for log Fold Change, where it is log base 2