From: Transcriptome and de novo analysis of Rosa xanthina f. spontanea in response to cold stress
Pathway | ID code | 4 °C vs. 23 °C | −20 °C vs. 23 °C | ||||||
---|---|---|---|---|---|---|---|---|---|
Total number of DEGs | Up | Down | P Value | Total number of DEGs | Up | Down | P Value | ||
Starch and sucrose metabolism | ko00500 | 221 | 37 | 184 | 1.36E-08 | 75 | 22 | 53 | 0.036091 |
Photosynthesis - antenna proteins | ko00196 | 21 | 18 | 3 | 0.005443 | 12 | 11 | 1 | 0.002156 |
Circadian rhythm - plant | ko04712 | 48 | 31 | 17 | 0.016043 | 37 | 22 | 15 | 3.92E-08 |
Plant-pathogen interaction | ko04626 | 274 | 103 | 171 | 0.017747 | 176 | 42 | 134 | 6.66E-16 |
Glycerolipid metabolism | ko00561 | 57 | 22 | 35 | 0.025967 | 29 | 12 | 17 | 0.004703 |
Nitrogen metabolism | ko00910 | 26 | 7 | 19 | 0.027501 | 15 | 0 | 15 | 0.003943 |
Anthocyanin biosynthesis | ko00942 | 12 | 4 | 8 | 0.040398 | 9 | 3 | 6 | 0.001390 |
Flavonoid biosynthesis | ko00941 | 28 | 5 | 23 | 0.045727 | 20 | 7 | 13 | 0.000119 |
Zeatin biosynthesis | ko00908 | 20 | 4 | 16 | 0.045810 | 14 | 8 | 6 | 0.000760 |
Fatty acid elongation | ko00062 | 28 | 4 | 24 | 0.002586 | – | – | – | – |
Carotenoid biosynthesis | ko00906 | 32 | 13 | 19 | 0.003827 | – | – | – | – |
Phenylpropanoid biosynthesis | ko00940 | 84 | 28 | 56 | 0.004435 | – | – | – | – |
Base excision repair | ko03410 | 30 | 6 | 24 | 0.006088 | – | – | – | – |
Ribosome biogenesis in eukaryotes | ko03008 | 75 | 25 | 50 | 0.014468 | – | – | – | – |
Ascorbate and aldarate metabolism | ko00053 | 49 | 13 | 36 | 0.025578 | – | – | – | – |
Riboflavin metabolism | ko00740 | 9 | 1 | 8 | 0.028072 | – | – | – | – |
Plant hormone signal transduction | ko04075 | – | – | – | – | 102 | 38 | 64 | 4.96E-07 |
Amino sugar and nucleotide sugar metabolism | Ko00520 | – | – | – | – | 60 | 14 | 46 | 0.000918 |
Cutin, suberine and wax biosynthesis | Ko00073 | – | – | – | – | 14 | 5 | 9 | 0.001240 |
Caffeine metabolism | ko00232 | – | – | – | – | 6 | 3 | 3 | 0.010312 |
Stilbenoid, diarylheptanoid and gingerol biosynthesis | ko00945 | – | – | – | – | 13 | 5 | 8 | 0.015090 |
Monoterpenoid biosynthesis | ko00902 | – | – | – | – | 7 | 5 | 2 | 0.018729 |
Tryptophan metabolism | ko00380 | – | – | – | – | 17 | 11 | 6 | 0.029553 |
Isoquinoline alkaloid biosynthesis | ko00950 | – | – | – | – | 13 | 3 | 10 | 0.036862 |
Tropane, piperidine and pyridine alkaloid biosynthesis | ko00960 | – | – | – | – | 11 | 4 | 7 | 0.038950 |
Brassinosteroid biosynthesis | ko00905 | – | – | – | – | 9 | 2 | 7 | 0.039466 |
Sesquiterpenoid and triterpenoid biosynthesis | ko00909 | – | – | – | – | 8 | 1 | 7 | 0.049619 |
Total | 1014 | 321 | 693 | 647 | 218 | 429 |