From: Chromosomal loci important for cotyledon opening under UV-B in Arabidopsis thaliana
ID | Chromosome | Marker Interval | QTL Position in cM | QTL Position Range in cM | High-Effect Allele | QTL Pvalue | h2of QTLs | Comparison to cotyledon opening QTL |
---|---|---|---|---|---|---|---|---|
Bay x Sha population1 | ||||||||
S.BS3_10 | 3 | ATHCHIB2-MSAT3.19 | 10.8 | 4 - 17.8 | Bay | P = 6.9 Ă— 10-4 | 0.016 | Same locus; higher variation allele has lower effect on opening. |
Ler x Col population2 | ||||||||
S.LCo2_45 | 2 | C2_074-C2_075 | 45.6 | 41 - 54 | Â | Â | Â | Locus is the same or nearby (intervals overlap), has significant UV-B variation effect but no additive main effect. Ler allele median variance is high in +UV-B round 1 (P = 0.0039), and Ler allele median variance is low in -UV-B round 2 (P = 0.016). |
S.Lco4_57 | 4 | C4_089-C4_090 | 57.1 | 55 - 58 | Col | P = 3.5 Ă— 10-5 | 0.043 | New locus, no UV-B-specific effect. |