Unique features of the rice blast resistance Pish locus revealed by large scale retrotransposon-tagging

BMC Plant Biology

Table 4 The numbers and positions of Tos17 insertions in a region of 155 kb including the Pish locus

Region	Independent^a/FST database^b	Length (bp)	Gene number
upstream region	0/0	50,000	6
Npi37-1	1/1	4,740	1
IG1^c	0/0	1,711	0
Npi37-2	4-96/294*	6,778	1
IG2^c	0/0	11,317	0
Npi37-3	0-168/500*	8,958	1
IG3^c	0/0	11,721	0
Pish	20-180/500*	8,695	1
downstream region	39/76	50,000	6
Total	232 (193^d)/1,371 (1,295^d)	153,920	16

a) Number of non-redundant flanking sequences.
b) Number of flanking sequences described in the FST database including redundant sequences.
c) Intergenic regions between Npi37-1 and Npi37-2 (IG1), between Npi37-2 and Npi37-3 (IG2) and between Npi37-3 and Pish (IG3).
d) Number of flanking sequences in the 55 kb genomic region including Npi37-1, Npi37-2, Npi37-3 and Pish.
* Data including sequences whose exact positions were not determined.

ISSN: 1471-2229