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Table 5 Significant sites identified with a structured association analysis

From: A candidate gene association study on muscat flavor in grapevine (Vitis viniferaL.)

Sites (bp) NC_012011

Markers

Non-synonymous change

P-value covariate (Q matrix) Bonferroni adjusted

P-value Markers - Muscat flavor Bonferroni adjusted

3762921

SNP 1822 (G/T)

K284N

2.11E-05

1.31E-10

3760568

SNP 4175 (T/G)

 

6.40E-09

4.45E-08

3760635

SNP 4108 (G/A)

V560I

1.55E-13

1.79E-05

  1. SNPs are named and scored according to their position on VvDXS ORF of V. vinifera PN40024; sites are referenced to the nucleotide positions relative to locus NC_012011.
  2. Holm-Bonferroni threshold value of P = 0.05 set to 4.90E-04.
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BMC Plant Biology

ISSN: 1471-2229

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