Table 6 Transposon content in the C. melo sequenced BACs.a
From: Sequencing of 6.7 Mb of the melon genome using a BAC pooling strategy
Family | Copies (no.) | Total lenght (bp) | Analyzed sequence (%) |
|---|---|---|---|
DNA transposons | Â | Â | Â |
CACTA | 15 | 30,238 | 0.48 |
hAT | 4 | 8,726 | 0.14 |
MULE | 6 | 17,836 | 0.28 |
PIF | 1 | 842 | 0.01 |
helitron | 1 | 830 | 0.01 |
Total | 27 | 58,472 | 0.93 |
Retrotransposons | Â | Â | Â |
Copia | 15 | 49,606 | 0.79 |
Gypsy | 18 | 80,452 | 1.28 |
Non-LTR | 3 | 9,664 | 0.15 |
Non-classified | 77 | 313,326 | 5.0 |
Total | 113 | 453,048 | 7.2 |