Figure 2
From: From RNA-seq to large-scale genotyping - genomics resources for rye (Secale cereale L.)
Heatmap of (t)BlastX analysis results to public model grass genomes and Triticeae EST and full length cDNA (flcDNA) resources. Contig sequences from the line-specific assemblies generated by CAP3 and the Sce_Assembly03 were aligned to public barley and wheat EST and flcDNA sequences and to Brachypodium, maize, rice, and sorghum genomic sequences. Percent hits to individual databases were counted using a 70% similarity cutoff and visualized in colours (colour code shown on the right).