Differences in gene expression within a striking phenotypic mosaic Eucalyptustree that varies in susceptibility to herbivory

Table 3 Statistical analysis (Fisher’s exact test) of the over or under representation of GO categories in the overR (ii) data set derived from the transcriptome of leaves from resistant branches of a mosaic Eucalyptus melliodora tree

GO Term	Name	Type	FDR	p-Value	Over/Under
GO:0003824	catalytic activity	F	0.45	0.00	+
GO:0007049	cell cycle	P	0.56	0.02	+
GO:0005198	structural molecule activity	F	0.56	0.02	-
GO:0005840	ribosome	C	0.56	0.04	-
GO:0030529	ribonucleoprotein complex	C	0.56	0.04	-
GO:0000166	nucleotide binding	F	0.56	0.04	-
GO:0005216	ion channel activity	F	0.56	0.04	+
GO:0015075	ion transmembrane transporter activity	F	0.56	0.04	+
GO:0015267	channel activity	F	0.56	0.04	+
GO:0022803	passive transmembrane transporter activity	F	0.56	0.04	+
GO:0022838	substrate-specific channel activity	F	0.56	0.04	+
GO:0022857	transmembrane transporter activity	F	0.56	0.04	+
GO:0022891	substrate-specific transmembrane transporter activity	F	0.56	0.04	+
GO:0022892	substrate-specific transporter activity	F	0.56	0.04	+
GO:0005975	carbohydrate metabolic process	P	0.56	0.04	+

Type refers to the GO category type: F = molecular function, P = biological processes and C = cellular component. FDR refers to the false discovery rate (FDR)- corrected p-value. p-Value refers to single test p-value. In the over/under column, + signifies over-represented categories and – signifies under-represented categories when compared to the reference data set (i).

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