Regulatory network rewiring for secondary metabolism in Arabidopsis thaliana under various conditions

BMC Plant Biology

Table 1 Network properties of five secondary metabolic regulatory networks

	No. of TFs	No. of genes	Average degree	No. of negative regulation	No. of positive regulation	No. of inconsistent regulation
FB	25	57	4.15	47	101	22
NSCB	14	25	4.05	14	42	23
PDB	22	38	4.40	22	85	25
SDB	7	4	3.45	7	9	3
TB	32	72	4.12	58	118	38

FB, flavonoids biosynthesis; NSCB, nitrogen-containing secondary compounds biosynthesis; PDB, phenylpropanoid derivatives biosynthesis; SDB, sugar derivatives biosynthesis; TB, terpenoids biosynthesis; TFs, transcription factor; Average degree, the mean value of nodes’ degree to present network density.

ISSN: 1471-2229