Figure 1From: Complete nucleotide sequence of the Cryptomeria japonicaD. Don. chloroplast genome and comparative chloroplast genomics: diversified genomic structure of coniferous speciesGene organization of the C. japonica chloroplast genome (see Table 1). Genes shown outside the circle are transcribed clockwise, while those located inside are transcribed counter-clockwise. Intron-containing genes are indicated by asterisks. Red boxes, ribosomal RNA genes; black boxes, transfer RNA genes; light orange boxes, large subunit of ribosomal protein genes; dark orange boxes, small subunit of ribosomal protein genes; dark purple boxes, DNA dependent RNA polymerase genes; dark green boxes, rbcL gene; yellowish-green boxes, subunits of photosystem I genes; green boxes, subunits of photosystem II genes; light blue boxes, subunits of cytochrome genes; dark blue boxes, subunits of ATP synthase genes; light yellow boxes, ORF genes; dark yellow boxes, subunits of NADH dehydrogenase genes; light purple boxes, chlorophyll biosynthesis genes. The pseudogene is indicated by ψ (pseudo-).Back to article page