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Table 1 Genes and proteins related to polyamine synthesis and the stress response

From: Transcriptome and proteome profiling of adventitious root development in hybrid larch (Larix kaempferi × Larix olgensis)

  

25-5/23-12

 

Gene

 

14 DAC

25 DAC

 

Query name

NR annotation

Relative read number

Species

UN_lyscdhit99_32363

S-adenosylmethionine synthase 2

322/180

380/303

Pinus contorta

UN_lyscdhit99_25323

S-adenosylmethionine decarboxylase proenzyme

205/150

346/227

Vitis vinifera

UN_lyscdhit99_17285

Embryo-abundant protein

39173/18594

33033/37185

Picea abies

UN_lyscdhit99_23395

Putative intracellular pathogenesis-related protein

518/206

147/343

Picea glauca

Protein

    

Spot no.

Protein name

-fold change

 

21

S-adenosylmethionine synthetase 2

1.2

2.4

Pinus contorta

22

S-adenosylmethionine decarboxylase

1.3

2.4

Pisum sativum

33

Late embryogenesis abundant protein

2.8

1.2

Picea glauca

45

Intracellular pathogenesis-related protein

3.5

 

Picea glauca

  1. Abbreviations: DAC days after cutting.
  2. 25-5, clone with strong rooting capacity; 23-12, clone with weak rooting capacity.
  3. “Read number”, number of reads assembled in a contig; the read number had been normalized to the total read number (Additional file 5).
  4. “-fold change” compares expression level in 25-5 with that in 23-12.
  5. Number in “spot no.” corresponds to Figure 5 and Additional file 3.
  6. “Species” the annotation information come from which plants.
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BMC Plant Biology

ISSN: 1471-2229

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