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Table 3 Details of bioinformatic analyses of DArT-seq markers closely linked to RphCantala

From: Genetic mapping of a new race specific resistance allele effective to Puccinia hordei at the Rph9/Rph12locus on chromosome 5HL in barley

DArT locus_name r 2with RphCantala Bowman cM C/S cM Fisher's P-value Barley physical Bowman physical Blastn P-value Morex physical Pfam Morex 5HL
DART4851 1 131.67 97.30 1.69E-17 5HL 506583400 3.40E-27 506781405-506781469 NB-ARC
DART4872 1 NA 90.74 1.69E-17 5HL NA 1.80E-11 509749584-509749620 No match
DART7507 1 NA 97.30 5.33E-16 5HL NA 2.00E-16 506713993-506714061 Tubulin -GTPase
DART7846 1 NA NA 3.93E-12 5HL NA 1.30E-19 9520434-9520483 Serine/threonine Protein Kinase
DART3079 0.937 130.9 102.04 1.38E-16 5HL 506583400 5.80E-32 9519766-9519834 Serine/threonine Protein Kinase
DART3263 0.937 134.72 NA 1.38E-16 5HL 509518480 1.40E-29 509705303-509705371 No match
DART5481 0.918 134.72 89.13 1.05E-12 5HL 509518480 5.80E-32 506948877-506948945 Inosine-5′-monophosphate dehydrogenase
DART2133 0.875 129.72 103.65 4.13E-15 5HL 505380600 1.40E-29 505484624-505484692 No match
DART2681 0.873 130.9 102.04 4.13E-15 5HL 506583400 1.40E-29 506600697-506604765 No match
DART6198 0.873 129.44 110.31 4.13E-15 5HL 504740440 1.40E-29 504879962-504880030 Cytochrome P450
DART4228 0.867 129.72 103.64 1.52E-14 5HL 505380600 5.80E-32 505484082-505484150 No match
DART4182 0.867 129.83 110.307 5.60E-14 5HL 505380600 5.80E-32 505506713-505506781 AP2 transcription factor
DART5422 0.857 129.83 111.92 7.50E-13 5HL 505380600 1.40E-29 505507578-505507646 AP2 transcription factor
DART461 0.817 129.44 115.15 6.41E-14 5HL 504780440 5.80E-32 504808312-504808380 Uncharacterised protein
  1. NA, not available.