A comparison of the low temperature transcriptomes of two tomato genotypes that differ in freezing tolerance: Solanum lycopersicum and Solanum habrochaites

Table 2 Total number of differentially expressed genes (DEG)

Group	Up Regulated Gene Numbe	Down Regulated Gene Number	Total
Tsh0 vs C0	3608	3897	7505
Tsh1 vs C1	2813	3592	6405
Tsh12 vs C12	3549	3815	7364
C1 vs C0	1256	856	2112
C12 vs C0	3350	3022	6372
C12 vs C1	3047	2748	5795
Tsh1 vs Tsh0	1725	1967	3692
Tsh12 vs Tsh0	2940	3126	6066
Tsh12 vs Tsh1	2962	2321	5283

C0, C1 and C12 represent S. lycopersicum cold treatment for 0 h, 1 h and 12 h, respectively; Tsh0, Tsh1 and Tsh12 indicate S. habrochaites cold treatment for 0 h, 1 h and 12 h, respectively

ISSN: 1471-2229