Genomic identification, characterization and differential expression analysis of SBP-box gene family in Brassica napus

Cheng, Hongtao; Hao, Mengyu; Wang, Wenxiang; Mei, Desheng; Tong, Chaobo; Wang, Hui; Liu, Jia; Fu, Li; Hu, Qiong

doi:10.1186/s12870-016-0852-y

Table 1 Nomenclature of BnaSBP genes

From: Genomic identification, characterization and differential expression analysis of SBP-box gene family in Brassica napus

Gene name	Accession number ^a	Length ^b	MW (kd) ^c	Introns	Locus ^d
BnaSBP1a	BnaA05g00780D	869	96.83	11	-
BnaSBP1b	BnaC04g00420D	860	95.76	10	-
BnaSBP2a	BnaA06g36780D	519	57.61	4	+
BnaSBP2b	BnaC07g17030D	516	57.49	4	-
BnaSBP2c	BnaA09g16340D	390	43.67	4	-
BnaSBP2d	BnaC09g17430D	385	43.3	4	-
BnaSBP3a	BnaA05g09840D	142	16.63	1	-
BnaSBP3b	BnaC03g18800D	187	21.88	1	+
BnaSBP3c	BnaC04g44230D	141	16.49	1	+
BnaSBP3d	BnaA04g19840D	141	16.56	1	+
BnaSBP3e	BnaCnng05200D	147	17.01	1	-
BnaSBP4a	BnaC06g41420D	179	20.4	1	+
BnaSBP4b	BnaA06g01110D	161	18.48	2	-
BnaSBP4c	BnaA05g14670D	176	20.19	2	-
BnaSBP4d	BnaC06g10070D	157	18.11	3	-
BnaSBP5a	BnaC05g38350D	179	20.77	1	+
BnaSBP5b	BnaA05g24340D	179	20.73	1	+
BnaSBP5c	BnaA01g28740D	176	20.5	1	-
BnaSBP5d	BnaC01g36290D	176	20.56	1	+
BnaSBP6a	BnaA02g14580D	328	37.1	3	+
BnaSBP6b	BnaC02g19100D	333	37.88	2	+
BnaSBP6c	BnaC02g14000D	328	37.08	3	+
BnaSBP6d	BnaA07g27730D	299	33.98	0	+
BnaSBP6e	BnaCnng61400D	319	36.22	1	+
BnaSBP7a	BnaC02g08350D	778	87.04	9	+
BnaSBP7b	BnaC09g39030D	797	89.15	9	-
BnaSBP7c	BnaA10g16180D	794	89	9	-
BnaSBP7d	BnaCnng09040D	779	87.17	9	+
BnaSBP8a	BnaA10g00110D	312	34.82	3	+
BnaSBP8b	BnaC05g00110D	233	26.47	2	+
BnaSBP8c	BnaAnng08550D	335	37.18	2	+
BnaSBP9a	BnaC04g48150D	367	40.4	2	+
BnaSBP9b	BnaA05g02680D	368	40.03	2	+
BnaSBP9c	BnaC04g02520D	370	40.34	2	+
BnaSBP9d	BnaA04g24340D	363	39.71	2	+
BnaSBP10a	BnaA09g27950D	329	36.77	3	+
BnaSBP10b	BnaC07g11390D	372	41.54	4	-
BnaSBP10c	BnaC07g11380D	371	41.72	4	+
BnaSBP10d	BnaAnng25050D	346	38.88	5	+
BnaSBP11a	BnaC05g21280D	367	40.82	3	-
BnaSBP11b	BnaA07g08840D	390	43.65	3	-
BnaSBP11c	BnaA07g08830D	374	41.58	3	-
BnaSBP11d	BnaA09g27960D	365	40.66	3	-
BnaSBP11e	BnaC03g57620D	365	41.01	4	-
BnaSBP11f	BnaC05g21270D	364	40.73	3	+
BnaSBP13a	BnaC09g27080D	359	39.17	2	+
BnaSBP13b	BnaA03g13580D	341	37.35	2	+
BnaSBP13c	BnaC03g16490D	341	37.68	2	+
BnaSBP13d	BnaC03g27870D	348	38.2	2	+
BnaSBP14a	BnaC05g16270D	1032	114.16	9	+
BnaSBP14b	BnaA06g14810D	1031	114.01	9	+
BnaSBP14c	BnaC06g37430D	980	107.93	10	+
BnaSBP15a	BnaA07g17550D	316	35.25	2	-
BnaSBP15b	BnaC06g16200D	325	36.48	2	-
BnaSBP15c	BnaC04g23930D	324	36.13	2	+
BnaSBP15d	BnaA04g27550D	308	34.43	2	-
BnaSBP16a	BnaC02g24160D	1002	110.89	9	+
BnaSBP16b	BnaA07g32890D	960	105.92	11	+

^a Accession numbers was corresponded to the annotation provided by Brassica napus genome database
^b The AA length of BnaSBP protein
^c Molecular weight of BnaSBP protein
^d +, the sense strand; −, the antisense strand

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