Table 3 Differentially expressed genes related to plant hormone signal transduction pathway among three dormancy stages
From: Comparative RNA-seq based transcriptomic analysis of bud dormancy in grape
Gene ID | ED (RPKM) | SB (RMKM) | PD (RPKM) | log2 | Description |
|---|---|---|---|---|---|
Abscisic acid | |||||
LOC100243241 | 57.43101 | 2332.938739 | 3537.44 | −3.38 | MLP-like protein 423 |
LOC100240944 | 854.1852 | 454.373409 | 206.4772 | 1.36 | Probable protein phosphatase 2C 49-like |
LOC100853603 | 2144.361 | 387.194545 | 134.615 | 2.56 | Threonine-protein kinase SAPK2-like |
LOC100245171 | 2084.503 | 1584.199761 | 792.508 | 1.5 | Serine/threonine-protein kinase SAPK10-like |
Gibberellin | |||||
LOC100255710 | 136.702 | 6.107169 | 0.001 | 4.6 | Probable carboxylesterase 8-like |
LOC100254982 | 76.84431 | 20.764376 | 11.13357 | 1.93 | Carboxylesterase 1-like |
LOC100261706 | 128.6131 | 29.314413 | 15.18215 | 2.1 | Nodulation-signaling pathway 1 protein-like |
LOC100253954 | 2184.805 | 1520.685199 | 706.4759 | 1.1 | Scarecrow-like protein 1 |
LOC100242700 | 131.8487 | 68.400298 | 32.38858 | 2.05 | Scarecrow-like protein 14-like |
Auxin | |||||
LOC100246547 | 464.3014 | 54.964525 | 46.55858 | 2.51 | Lysine histidine transporter 1-like |
LOC100244496 | 731.638903 | 10.51554 | 720.6459 | −3.68 | Auxin-responsive protein IAA33-like |
LOC100854934 | 19.4133 | 131.914861 | 78.94716 | −1.1 | An-induced protein 22A-like |
Ethylene | |||||
LOC100259653 | 124.5687 | 50.07879 | 18.21858 | 1.74 | Serine/threonine-protein kinase HT1-lik |
LOC100257625 | 1881.472 | 1408.313281 | 1212.547 | 1.09 | Serine/threonine-protein kinase HT1-like |