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Table 2 Amino acid sites using the branch-site model under positive selection

From: Evolution, gene expression profiling and 3D modeling of CSLD proteins in cotton

Foreground

ω

P-value

Site under positve selection

CSLD1 branch

7.91

P < 0.001

S29*, K116*, C157*, A244*, C795*, Q894*, A912*, C917*, C947*

CSLD1 clade

3.56

P < 0.001

D2**, N6*, S8*, S29*, K116*, C157*, N188*, A244*, C795*, Q894*, A912*, C917*, W952*

CSLD4 branch

5.39

P < 0.001

T314*, F929*, Q953*, G1046*, G1104*

CSLD4 clade

2.57

P < 0.001

Q953*, G1104*

  1. Sites are numbered according to the full GrCSLD1 coding sequence. Sites with posterior probabilities greater than 0.95 (*) and 0.99 (**) are shown