Table 2 Association analysis between SNP markers and the three traits studied. Na+ and K+ concentration in third leaf, and K+/Na+ ratio were analysed in the F2 cross Jandaroi × AUS-14740. A LOD score of the association, the percentage of phenotypic trait variability and origin of the favourable allele were identified by marker regression analysis (MRA) in QTX MapManager
From: Genetics of Na+ exclusion and salinity tolerance in Afghani durum wheat landraces
Chromosome | Marker | LOD score | Phenotypic variability (%) | Origin of favorable allele |
|---|---|---|---|---|
(A) Na+ concentration in third leaf | ||||
1A | Xm2584 | 0.6 | 3 | Jandaroi |
3B | Xm5511 | 3.4* | 18* | Jandaroi |
4B | Xm6828 | 0.3 | 2 | AUS-14740 |
4B | Xm564 | 3.4* | 18* | AUS-14740 |
(B) K+ concentration in third leaf | ||||
3B | Xm5511 | 0.3 | 2 | AUS-14740 |
4B | Xm6828 | 0.6 | 4 | AUS-14740 |
4B | Xm564 | 3.9* | 20* | AUS-14740 |
7A | Xm3054 | 0.8 | 4 | AUS-14740 |
(C) Ratio K+/Na+ | ||||
1A | Xm2584 | 0.3 | 1.3 | AUS-14740 |
3B | Xm5511 | 1.1 | 6 | Jandaroi |
4B | Xm6828 | 0.9 | 6 | AUS-14740 |
4B | Xm564 | 5.6* | 27* | AUS-14740 |
7A | Xm3054 | 1.5 | 7 | AUS-14740 |