Table 1 The statistics of sRNA-seq reads and mapped reads
Sample | Raw tag count | Clean tag count | Mapped tag | |
|---|---|---|---|---|
4LCK | 4LCK1 | 14,616,241 | 13,450,762 (92.03%) | 11,808,888 (87.79%) |
4LCK2 | 14,188,727 | 13,093,721 (92.28%) | 11,354,540 (86.72%) | |
4LTR | 4LTR1 | 13,857,570 | 13,091,406 (94.47%) | 11,553,579 (88.25%) |
4LTR2 | 14,917,562 | 13,972,496 (93.66%) | 12,378,849 (88.59%) | |
4RCK | 4RCK1 | 14,030,718 | 13,581,849 (96.80%) | 9,745,151 (71.75%) |
4RCK2 | 14,413,900 | 13,418,770 (93.1%) | 11,029,802 (82.20%) | |
4RTR | 4RTR1 | 14,204,427 | 13,435,279 (94.59%) | 11,365,167 (84.59%) |
4RTR2 | 15,072,841 | 14,023,972 (93.04%) | 11,923,337 (85.02%) | |
7LCK | 7LCK1 | 14,317,284 | 13,327,929 (93.09%) | 11,572,537 (86.83%) |
7LCK2 | 13,959,190 | 13,191,592 (94.50%) | 11,629,503 (88.16%) | |
7LTR | 7LTR1 | 14,658,533 | 13,284,854 (90.63%) | 11,633,927 (87.57%) |
7LTR2 | 14,188,312 | 13,219,825 (93.17%) | 11,649,344 (88.12%) | |
7RCK | 7RCK1 | 13,871,471 | 13,214,641 (95.26%) | 10,669,227 (80.74%) |
7RCK2 | 14,524,499 | 14,045,921 (96.71%) | 11,739,632 (83.58%) | |
7RTR | 7RTR1 | 14,264,729 | 13,425,669 (94.12%) | 11,429,694 (85.13%) |
7RTR2 | 13,031,859 | 12,514,469 (96.03%) | 10,459,342 (83.58%) | |
Total | 228,117,863 | 214,293,155 | 181,942,519 | |
Average | 14,257,366 | 13,393,322 (93.97%) | 11,371,407 (84.91%) | |