Methods | UBC genes | RING genes | U-box genes | F-box genes |
---|
HMMER searcha | 107 | 1234 | 158 | 579 |
Pfam Search | 99 | 826 | 127 | 572 |
NCBI Search | 106 | 1034 | 145 | 470 |
Preliminary Hitsb | 106 | 1034 | 145 | 547 |
Manual Validation | 91 | 760 | 124 | 472 |
- aMultiple annotated proteins corresponding to alternative spliced transcripts of the same gene were found in HMMER search. The sequence of the primary transcript for these genes as specified by the database was used
- bThe number of Preliminary Hit denote the number of corresponding UBS component identified after combining the Pfam and NCBI searches