| 1st batch 4-week-old (LD) | 2nd batch (2 biological replicates) 2-week-old (LD) | Nishimura et al (2013) 6-week-old (SD) | |||||
---|---|---|---|---|---|---|---|---|
SYMBOL | ID | clpc1/WS | ΔN/WS | CP/WS | clpci/ws | ΔN/WS | CP/WS | clpc1–1/wt |
a. over-accumulated | ||||||||
 RPS4 | ATCG00380.1 | 6.5 ± 0.4 | 4.9 ± 0.3 | 0.7 ± 0.1 | 1.8 ± 0.2 | 1.9 ± 0.0 | 0.8 ± 0.1 | 18.6 |
 CLPP1 | ATCG00670.1 | 4.7 ± 0.3 | 3.2 ± 0.1 | 1.0 ± 0.2 | 1.5 ± 0.0 | 1.2 ± 0.2 | 0.9 ± 0.2 | 1.2 |
 RPS15 | ATCG01120.1 | 3.4 ± 0.3* | 2.8 ± 0.2 | 0.8 ± 0.1 | 1.7 ± 0.5 | 1.4 ± 0.1 | 1.1 ± 0.4 | 1.0 |
 RPL22 | ATCG00810.1 | 3.4 ± 0.3* | 2.9 ± 0.3 | 0.9 ± 0.1 | 2.1 ± 0.1* | 1.9 ± 0.1 | 1.0 ± 0.0 | n.a |
 RPS8 | ATCG00770.1 | 3.3 ± 0.4 | 2.5 ± 0.4 | 0.8 ± 0.1 | 1.8 ± 0.5 | 1.5 ± 0.2 | 1.0 ± 0.1 | 10.7 |
 RPOB | ATCG00190.1 | 3.3 ± 0.6* | 3.9 ± 0.9 | 1.3 ± 0.1 | 1.5 ± 0.0* | 1.7 ± 0.0 | 1.6 ± 0.2 | n.a |
 RPS18 | ATCG00650.1 | 3.2 ± 0.4* | 2.6 ± 0.1 | 0.8 ± 0.1 | 1.6 ± 0.1* | 1.7 ± 0.1 | 1.0 ± 0.2 | n.a |
 RPS2 | ATCG00160.1 | 3.2 ± 0.1 | 2.8 ± 0.1 | 0.9 ± 0.1 | 1.6 ± 0.6 | 1.5 ± 0.4 | 0.9 ± 0.2 | 4.5 |
 RPS7 | ATCG00900.1 | 3.1 ± 0.2 | 2.6 ± 0.2 | 0.8 ± 0.1 | 1.6 ± 0.2 | 1.5 ± 0.1 | 1.0 ± 0.3 | 175.6 |
 RPS3 | ATCG00800.1 | 3.0 ± 0.2* | 2.5 ± 0.2 | 1.0 ± 0.1 | 1.8 ± 0.0* | 1.7 ± 0.0 | 0.8 ± 0.1 | 0.9 |
 RPOA | ATCG00740.1 | 3.0 ± 0.4* | 3.0 ± 0.2 | 0.9 ± 0.1 | 2.0 ± 0.1* | 1.9 ± 0.1 | 1.5 ± 0.1 | n.a |
 RPS14 | ATCG00330.1 | 2.9 ± 0.6 | 2.3 ± 0.4 | 0.9 ± 0.1 | 1.0 ± 0.7 | 1.4 ± 0.2 | 1.2 ± 0.4 | n.a |
 RPL20 | ATCG00660.1 | 2.7 ± 0.5* | 2.8 ± 0.6 | 0.8 ± 0.1 | 1.9 ± 1.1* | 1.5 ± 0.1 | 3.6 ± 2.3 | n.a |
 RPL14 | ATCG00780.1 | 2.6 ± 0.2 | 2.7 ± 0.3 | 0.9 ± 0.1 | 1.9 ± 0.2 | 1.7 ± 0.2 | 0.5 ± 0.0 | 1.6 |
 RPS19 | ATCG00820.1 | 2.6 ± 0.5* | 2.3 ± 0.4 | 0.8 ± 0.1 | 2.5 ± 0.8* | 1.5 ± 0.1 | 1.2 ± 0.1 | n.a |
 ACCD | ATCG00500.1 | 2.5 ± 0.2* | 2.2 ± 0.2 | 1.0 ± 0.1 | 1.5 ± 0.1 | 1.3 ± 0.1 | 0.8 ± 0.0 | n.a |
 RPL16 | ATCG00790.1 | 2.2 ± 0.2* | 2.1 ± 0.1 | 1.0 ± 0.1 | 1.3 ± 0.2 | 1.2 ± 0.0 | 1.7 ± 0.1 | n.a |
 RPOC2 | ATCG00170.1 | n.a | n.a | n.a | 1.5 ± 0.1 | 1.6 ± 0.0 | 1.5 ± 0.3 | n.a |
b. under-accumulated | ||||||||
 PSAB | ATCG00340.1 | 0.4 ± 0.1* | 0.5 ± 0.1 | 1.1 ± 0.1 | 0.6 ± 0.1* | 0.7 ± 0.1 | 2.6 ± 0.6 | n.a |
 PSBC | ATCG00280.1 | 0.4 ± 0.1* | 0.5 ± 0.1 | 1.0 ± 0.1 | 0.6 ± 0.1* | 0.7 ± 0.0 | 2.9 ± 0.1 | n.a |
 PSAA | ATCG00350.1 | 0.4 ± 0.1* | 0.5 ± 0.1 | 1.2 ± 0.1 | 0.6 ± 0.2 | 0.8 ± 0.3 | 2.6 ± 1.0 | n.a |
 PETB | ATCG00720.1 | 0.4 ± 0.1 | 0.5 ± 0.1 | 1.2 ± 0.1 | 0.4 ± 0.0 | 0.5 ± 0.0 | 1.2 ± 0.1 | 1.0 |
 PSBA | ATCG00020.1 | 0.3 ± 0.1* | 0.6 ± 0.1 | 1.0 ± 0.1 | 0.7 ± 0.1 | 0.7 ± 0.1 | 2.3 ± 0.2 | n.a |
 PSBD | ATCG00270.1 | 0.3 ± 0.1* | 0.5 ± 0.1 | 1.0 ± 0.1 | 0.8 ± 0.1 | 0.8 ± 0.0 | 2.8 ± 0.1 | n.a |
 PSBB | ATCG00680.1 | 0.3 ± 0.1* | 0.5 ± 0.1 | 1.1 ± 0.1 | 0.6 ± 0.1* | 0.7 ± 0.1 | 2.2 ± 0.5 | n.a |
 PSBH | ATCG00710.1 | 0.3 ± 0.1* | 0.5 ± 0.1 | 0.8 ± 0.1 | 0.3 ± 0.0* | 0.5 ± 0.0 | 0.8 ± 0.0 | n.a |
 PSBE | ATCG00580.1 | 0.3 ± 0.1* | 0.5 ± 0.1 | 0.9 ± 0.1 | 0.8 ± 0.2 | 0.7 ± 0.2 | 2.2 ± 0.3 | n.a |
 PSAC | ATCG01060.1 | 0.2 ± 0.1* | 0.3 ± 0.1 | 1.0 ± 0.1 | 0.2 ± 0.0* | 0.3 ± 0.0 | 1.0 ± 0.0 | n.a |