Fig. 8

Subnetworks for common DEGs in co-expression, process-gene and homologous networks. a Co-expression subnetwork of the 153 DEGs that have common edges in the co-expression and process-gene networks, which has 350 undirected edges. b Process-gene subnetwork of the 153 DEGs with 7606 undirected edges. c Homologous gene network in A. thaliana that consists of 466 nodes and 720 directed edges. 86 of the 466 genes are homologous with the 153 common DEGs in (a) and (b). d Homologous relationships among the top-36 highly connected genes in (c) between A. thaliana and B. napus. Different shapes of nodes denote genes from different families; Different colors corresponding to different kinds of stress responsiveness. To distinguish between WRKYs and AP2/EREBPs, nodes with prefix “A” correspond to AP2/EREBPs