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Fig. 2 | BMC Plant Biology

Fig. 2

From: Target sequencing reveals genetic diversity, population structure, core-SNP markers, and fruit shape-associated loci in pepper varieties

Fig. 2

Characteristics of the perfect SNPs used to genotype pepper varieties by Target SNP-seq. a Distribution of the 92 perfect SNPs in the ideogram of the genome of C. annuum Zunla-1 [3]. b Observed heterozygosity (Ho) per SNP locus, colored in red. c Expected heterozygosity (He) per SNP locus is presented in green. d Polymorphism information content (PIC) per SNP locus is presented in blue. e Minor allele frequency (MAF) per SNP locus is given in yellow. This figure was generated using Circos (http://circos.ca/) with the SNP region magnified to 2 Mb

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BMC Plant Biology

ISSN: 1471-2229

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