Genome-wide association reveals genetic variation of lint yield components under salty field conditions in cotton (Gossypium hirsutum L.)

Table 1 GWAS analysis of three traits under four salt conditions by multi-loci MLM model

Trait	Salt condition	Number of stable/total QTL	Detected count of stable/total QTL^a
SBW	A	21/49	69/103
	B	12/39	56/90
	C	13/40	48/76
	D	18/47	50/87
	Total	42/151	223/356
LP	A	49/136	113/209
	B	56/188	131/276
	C	57/165	110/224
	D	50/106	97/159
	Total	91/417	451/868
BNPP	A	7/30	25/53
	B	9/31	32/60
	C	8/24	29/50
	D	8/34	27/59
	Total	25/112	113/222
Total		150/600	787/1446

^a indicated the detected counts of QTLs in different methods, years or replications. SBW single boll weight; LP lint percentage; BNPP boll number per plant. A, B, C, and D represented the total salt contents under the four soil environments, with 19 g/Kg (condition A), 10 g/Kg (condition B), 7 g/Kg (condition C), and 5 g/Kg (condition D), respectively

ISSN: 1471-2229