Table 3 Predictive ability (PA) and prediction accuracies estimated by two implemented strategies in parenthesis (r1, r2) of phenotypes for non-genotyped (NG), genotyped (G) and total (T) population using only pedigree (ABLUP), pedigree and markers using standard weighting (HBLUP) and pedigree and markers using weighting derived from the model showing best fit in terms of DIC using genotypic values (HBLUP1)
Kaingaroa | Kinleith 1 | Kinleith 2 | Kinleith 2 | Kinleith 2 | ||
|---|---|---|---|---|---|---|
Model | Pop. | Age 2 | Age 2 | Age 2 | Age 3 | Age 4 |
NG | NA | NA | NA | NA | NA | |
ABLUP | G | NA | NA | NA | NA | NA |
T | 0.346 | 0.260 | 0.362 | 0.454 | 0.413 | |
(0.809,0.616) | (0.830,0.648) | (0.745,0.788) | (0.729,0.746) | (0.738,0.795) | ||
NG | 0.270 | 0.224 | 0.320 | 0.373 | 0.322 | |
(0.758,0.480) | (0.812,0.558) | (0.726,0.697) | (0.676,0.613) | (0.688,0.620) | ||
HBLUP | G | 0.409 | 0.282 | 0.433 | 0.584 | 0.477 |
(0.804,0.728) | (0.792,0.703) | (0.759,0.942) | (0.794,0.960) | (0.743,0.918) | ||
T | 0.357 | 0.254 | 0.375 | 0.488 | 0.404 | |
(0.790,0.635) | (0.801,0.633) | (0.738,0.816) | (0.746,0.802) | (0.718,0.778) | ||
NG | 0.253 | 0.231 | 0.312 | 0.357 | 0.327 | |
(0.747,0.450) | (0.817,0.576) | (0.722,0.679) | (0.663,0.587) | (0.690,0.629) | ||
HBLUP1 | G | 0.415 | 0.285 | 0.428 | 0.593 | 0.474 |
(0.831,0.738) | (0.832,0.710) | (0.775,0.932) | (0.807,0.975) | (0.759,0.912) | ||
T | 0.353 | 0.259 | 0.369 | 0.485 | 0.405 | |
(0.801,0.628) | (0.825,0.646) | (0.745,0.803) | (0.746,0.797) | (0.727,0.779) |