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Fig. 6 | BMC Plant Biology

Fig. 6

From: Transcriptomic analysis at organ and time scale reveals gene regulatory networks controlling the sulfate starvation response of Solanum lycopersicum

Fig. 6

A gene regulatory network analysis identifies new TFs involved in the sulfate starvation response in tomato plants. a. TFs from the root regulatory network that have over-represented biological functions in their target genes. The root regulatory network was constructed considering TF-target interaction according to the information available in PlantRegMap and Pearson correlation threshold > 0.9 in root samples. b TFs of the leaf regulatory network with over-represented biological functions in their target genes. TFs and their potential targets were identified using the information available in PlantRegMap and Pearson correlation threshold > 0.9 in leaf samples. c RT-qPCR analysis of EIL3 TF (Solyc01g006650) in tomato plants. A Student’s t-test was performed to test the significance (P < 0.05) of the differences between sulfate-starved and control samples (*). Values plotted correspond to the means of three independent experiments ± standard deviation. 3–5 different plants were measured for each experimental replicate

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BMC Plant Biology

ISSN: 1471-2229

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