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Table 2 Candidate genes related to flower color in roses

From: Integrated metabolome and transcriptome analysis of the anthocyanin biosynthetic pathway in relation to color mutation in miniature roses

Function

Gene

Enzyme

KO ID (EC No.)

Totala

Upb

Downc

Anthocyanin biosynthesis

CHS

Chalcone synthase

K00660 (2.3.1.74)

3

3

0

CHI

Chalcone isomerase

K01859 (5.5.1.6)

11

0

0

F3H

Flavanone 3-hydroxylase

K00457 (1.14.11.9)

1

0

0

F3’H

Flavanone 3′-hydroxylase

K05280 (1.14.13.21)

1

0

0

DFR

Dihydroflavonol 4-reductase

K13082 (1.1.1.219)

5

2

0

ANS

Anthocyanidin synthase

K05277 (1.14.11.19)

5

0

1

BZ1

Anthocyanidin 3-O-glucosyltransferase

K12930 (2.4.1.115)

7

1

1

UGT79B1

Anthocyanidin 3-O-glucoside 2′′′-O-xylosyltransferase

K17193 (2.4.2.51)

3

1

0

GT1

Anthocyanidin 5,3-O-glucosyltransferase

K12938 (2.4.1.-)

5

1

0

Flavone and flavonol biosynthesis

UGT78D2

Flavonol 3-O-glucosyltransferase

K10757 (2.4.1.91)

3

1

0

FLS

Flavonol synthase

K05278 (1.14.11.23)

13

3

0

IF7MAT

Isoflavone 7-O-glucoside-6′′-O-malonyltransferase

K13264 (2.3.1.115)

9

1

0

Flavanone biosynthesis

ANR

Anthocyanidin reductase

K08695 (1.3.1.77)

2

0

0

LAR

Leucoanthocyanidin reductase

K13081 (1.17.1.3)

1

0

0

  1. a The total number of transcripts analyzed. b The number of transcripts significantly upregulated in H vs. S. c The number of transcripts significantly downregulated in ZH vs. ZS. KO Kyoto Encyclopedia of Genes and Genomes Orthology, EC Enzyme Commission, H Neptune King, S Queen