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Table 3 QTL analysis of spinach leaf-associated traits

From: Quantitative trait loci (QTL) analysis of leaf related traits in spinach (Spinacia oleracea L.)

Traits

QTL

Linkage maps

Closed Marker

Position (cM)

Marker interval

LOD

% Expl.

Add.

LL

qLL5.1

SLAF-seq

Marker3744695

86.036

Marker236827- Marker1233484

4.58

6.1

1.69

qLL5.2

SLAF-seq

Marker3268124

149.824

Marker1984033-

Marker628287

7.60

20.1

2.02

qLL5.3

SLAF-seq

Marker3102838

180.406

Marker600011-

Marker3102838

6.61

14.2

1.93

qLL5.3

2015

KM2191098

87.503

KM1360385-

KM3102838

24.58

50.7

2.58

qLL3.1

2015

KM2595105

39.139

KMC1_4183144-

KM3677307

3.7

5.4

0.84

qLL5.3

2019

KM1360385

76.692

KM3718793-

KM3102838

8.39

22.2

2.19

LW

qLW.3.1

SLAF-seq

Marker3309304

0

Marker3309304-

Marker2310789

3.72

6.8

0.71

qLW.3.2

SLAF-seq

Marker3098699

22.339

Marker3109716-

Marker40134

3.97

7.2

0.78

qLW.3.3

SLAF-seq

Marker3677664

50.675

Marker351364-

Marker643757

4.434

9.3

0.76

qLW.3.1

2015

KM3309304

0

KM3309304-

KM3363916

3.01

6.9

0.51

qLW.3.3

2015

KM41831444

37.623

KM636298-

KM2595105

3.9

9

0.57

qLW.3.1

2019

KM3309304

4

KM3309304-

KM706861

2.02

5.7

0.80

PL

qPL5.1

SLAF-seq

Marker3412457

105.929

Marker1572269-

Marker3601009

6.82

19.5

0.77

qPL5.2

SLAF-seq

Marker3102838

180.406

Marker3601009-

Marker3102838

5.06

16.5

0.67

qPL5.2

2015

KM2191098

87.503

KM483812-

KM3102838

12.14

31.6

0.94

qPL5.2

2019

KM3102838

77.315

KM3645350-

KM2191098

9.28

24.2

1.84

LR

qLR3.1

SLAF-seq

Marker3339555

107.483

Marker304732-

Marker3743797

3.39

6.9

-0.11

qLR5.1

SLAF-seq

Marker1997127

159.994

Marker376664-

Marker870652

12.03

25.1

0.31

qLR5.2

SLAF-seq

Marker3102838

180.406

Marker870652-

Marker3102838

8.53

20.3

0.31

qLR3.2

2015

KM101448

27.414

KM2939803-

KM2939934

4.36

6.4

-0.1

qLR5.2

2015

KM2191098

87.503

KM1360385-

KM3102838

24.76

51.4

0.42

qLR5.2

2019

KM1360385

76.692

KM3718793-

KM3102838

14.43

32.5

0.17

  1. % Expl, Percentage of phenotype variation explained; Add. additive effect