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Table 3 Summary of annotations of the unigenes in the A. chinensis rhizomes transcriptome against public databases

From: Comparative transcriptome analysis reveals sesquiterpenoid biosynthesis among 1-, 2- and 3-year old Atractylodes chinensis

Database

Unigenes

Percentage (%)

Nr

56,759

39.52

Swiss-Prot

37,475

26.09

Pfam

31,272

21.77

COG

6,540

4.55

GO

39,372

27.41

KEGG

31,424

14.92

Total annotation

58,466

40.71

  1. Note: the link of databases: Nr (version 2019.6.26; http://ftp.ncbi.nlm.nih.gov/blast/db/), Swiss-Prot (version 2019.7.1; http://web.expasy.org/docs/swiss-prot_guideline.html), Pfam (version 32.0; http://pfam.xfam.org/), COG (eggnog version 5.0; http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/COG/), GO (http://www.geneontology.org/), KEGG (version 2017.08; http://www.genome.jp/kegg/)
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BMC Plant Biology

ISSN: 1471-2229

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