Table 4 Categorization of M. denudata unigenes to KEGG biochemical pathways
KEGG categories | Unigene -number | Ratio of no. | Pathway |
|---|---|---|---|
Ribosome | 315 | 3.35% | ko03010 |
Carbon metabolism | 307 | 3.26% | ko01200 |
Biosynthesis of amino acids | 292 | 3.11% | ko01230 |
Spliceosome | 284 | 3.02% | ko03040 |
Plant hormone signal transduction | 251 | 2.67% | ko04075 |
Endocytosis | 251 | 2.67% | ko04144 |
Starch and sucrose metabolism | 250 | 2.66% | ko00500 |
Protein processing in endoplasmic reticulum | 222 | 2.36% | ko04141 |
Oxidative phosphorylation | 218 | 2.32% | ko00190 |
Purine metabolism | 202 | 2.15% | ko00230 |
RNA transport | 198 | 2.11% | ko03013 |
Pyrimidine metabolism | 166 | 1.77% | ko00240 |
Phenylpropanoid biosynthesis | 166 | 1.77% | ko00940 |
mRNA surveillance pathway | 159 | 1.69% | ko03015 |
PI3K-Akt signaling pathway | 159 | 1.69% | ko04151 |
Ubiquitin mediated proteolysis | 158 | 1.68% | ko04120 |
Glycolysis / Gluconeogenesis | 154 | 1.64% | ko00010 |
Cell cycle | 150 | 1.60% | ko04110 |
Amino sugar and nucleotide sugar metabolism | 141 | 1.50% | ko00520 |
RNA degradation | 138 | 1.47% | ko03018 |
Pyruvate metabolism | 126 | 1.34% | ko00620 |
Glycerophospholipid metabolism | 122 | 1.30% | ko00564 |
AMPK signaling pathway | 121 | 1.29% | ko04152 |
Cell cycle - yeast | 118 | 1.25% | ko04111 |
Oocyte meiosis | 109 | 1.16% | ko04114 |
Peroxisome | 107 | 1.14% | ko04146 |
Fatty acid metabolism | 106 | 1.13% | ko01212 |
Cysteine and methionine metabolism | 105 | 1.12% | ko00270 |
Phagosome | 105 | 1.12% | ko04145 |
Photosynthesis | 104 | 1.11% | ko00195 |
Ras signaling pathway | 102 | 1.08% | ko04014 |
Ribosome biogenesis in eukaryotes | 101 | 1.07% | ko03008 |
Regulation of actin cytoskeleton | 100 | 1.06% | ko04810 |
Others | 6414 | 68.21% | Â |