Genome and transcriptome analysis to understand the role diversification of cytochrome P450 gene under excess nitrogen treatment

Table 1 Site-specific profiles for two types of functional divergence (Type-I and Type-II), measured by the posterior ratio

Comparison pairwise	Types	θ	LRT	p-value	Cutoff of posterior probability	Number of RFD
CYP51H/CYP51G	I	0.4729 ± 0.135917	12.105816	< 0.01	0.694309	14
CYP74A/CYP74B	I	0.2984 ± 0.091536	10.627121	< 0.01	0.671592	6
CYP97A/CYP97B	I	0.5808 ± 0.187075	9.638727	< 0.01	0.684058	29
CYP97A/CYP97C	I	0.5336 ± 0.161246	10.951024	< 0.01	0.673728	24
CYP97B/CYP97C	I	0.4912 ± 0.150662	10.629417	< 0.01	0.701093	17
CYP97A/CYP97B	II	0.2443 ± 0.058375		< 0.01	1.126562	52
CYP97A/CYP97C	II	0.2374 ± 0.055073		< 0.01	1.076256	62
CYP97B/CYP97C	II	0.2409 ± 0.058073		< 0.01	1.151247	69

θ: the coefficients of Type-I and Type-II functional divergence between two gene clusters; LRT Likelihood ratio statistic
Cutoff of posterior probability: minimum posterior probability of amino acid sites leading to functional divergence
Number of RFD: the predicted number of amino acid sites associated with functional divergence

ISSN: 1471-2229