Fig. 9
From: Transcriptional and epigenetic changes during tomato yellow leaf curl virus infection in tomato
Tomato epigenome landscape upon TYLCV infection. A Density plot of 5-methylcytosine in different contexts (CG, CHG and CHH) across tomato chromosomes for TYLCV-infected and mock samples. Chromosomes names are indicated on the outer rims. B Methylation rate in genes and TEs/repeats in the two biological replicates (R1 and R2) from mock and infected plants. Transcriptional start site (TSS) and polyadenylation sites (PAS) are indicated. C Total number and % of DMRs(TYLCV/mock) on each methylation context (CG, CHG and CHH). D Number of hypo-methylated and hyper-methylated regions in genes and TEs/repeats